esmaeil.jpgDr Esmaeil Ebrahimie
Biography/ Background
For more than 5 years, in addition to lecturing on and Bioinformatics, Application of Statistical Softwares, Multivariate Analysis, Statistical Designs, and Data Mining; I have worked on the initiative application of novel Bioinformatics and data mining approaches in different fields of research such as in infectious diseases, influenza research, cancer studies, agricultural science (drought and salt stresses), and protein science.
These attempts have resulted in numerous publications in internationally refereed journals. My strength and talent is in finding suitable statistical methods to unravel effective factors and statistical monitoring/modeling the progress of factors.
Qualifications
-Ph.D. 2002-2007. Plant Breeding-Molecular Genetics & Genetic Engineering
Title of thesis: A study on factors triggering the different in vitro morphogenesis pathways, University of Tehran, Iran.-M.Sc. 1999-2002. Plant Breeding
Title of thesis: A study on shoot organogenesis, direct shoot regeneration, and GOX (glucose oxidase) genetic transformation in cumin in order to induce resistance against wilting disease by using Agrobacterium method. University of Tehran, Iran.-B.Sc. 1995-1999. Crop Production & Plant Breeding, Shiraz University, Iran
Awards & Achievements
-Honorary Title of Adjunct Lecturer awarded by The University of Adelaide, from 1 November 2011 to 31 October 2014 at School of Molecular and Biomedical Science.
-Winner of 2009 International Vavilov-Frankel Fellowship for the proposal entitled: Gene discovery in Australian wild native soybeans at The University of Adelaide
-Winner of American Society of Horticulture (ASHS) conference 2006 student travel grant, USA for the paper entitled: Firitillaria species are in the risk of extinction in Iran: study on effective factors and necessity of international attention
-PhD thesis certified by University of Tehran with excellent degree, 2007
-Receiving full financial support to attend at International Training Course on: Biotechnological Tools for Plant Improvement, Sponsored by ICRO (International Cell Research Organization), UNESCO (United Nations Educational, Scientific and Cultural Organization) and EMBO (European Molecular Biology Organization). India, 2003, Awarded by ICRO
-Achieving the title of "Outstanding M.S. student thesis of Tehran University (2003)" for the thesis entitled: A study on shoot organogenesis, direct shoot regeneration, and GOX (glucose oxidase) genetic transformation in cumin in order to induce resistance against wilting disease by using Agrobacterium method. University of Tehran, Iran
-Outstanding student Researcher of Tehran University, 2003, Awarded by Tehran University, Iran
-Excellent B.S. Student in Department of Crop Production & Plant Breeding, Shiraz University, Awarded by Shiraz University (among the top three students), 1999
Teaching Interests
Bioinformatics and Computational Biology Statistical Analysis Multivariate Statistical Analysis
Research Interests
-Regulatory mechanisms: In silico promoter analysis and Transcription factors;
-Expressed Sequene Tags (EST Analysis)
-Microarray analysis
-MicroRNA analysis
-Gene Networks
-Next generation data sequence analyses (RNA-Seq, De-novo assembly, Mapping, SNP and Structural Variant detection; ChipSeq, Transcriptomics
-Data mining (Decision Tree analysis, Neural Networks, Feature Selection, and Feature Weighting)
-EST-SSRs
-Protein Bioinformatics
- Experience in working in bioinformatics analysis of different organisms including plants, human, bacteria, virus, and cancer analysis-Designing and analysing the statistical based experiments
تحصیل در دانشگاه ادلاید (University of Adelaide)
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پاسخ : تحصیل در دانشگاه ادلاید (University of Adelaide)
پاسخ : تحصیل در دانشگاه ادلاید (University of Adelaide)
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